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The Neandertal Genome Browser
The Neandertal genome browser displays data for 1x coverage of the Neandertal genome derived from 3 Neandertal individuals from Vindija cave, Croatia.
Data is available for each individual, as well as for a combined consensus of the three individuals.
A more extensive description of the data is available here
The browser presents a mapping of the Neandertal genome sequencing reads to the human genome, rather than an independent assembly of the Neandertal genome.
Start Browsing NEANDERTAL data
- Browse Neandertal
- SNP view
- SeqAlignView (Shows read-depth data alongside SNPs )
Links
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UCSC mirror |
Data Access
Alignments to human (hg18) are available for a combined consensus of reads from 6 Neandertal individuals, as well as for each individual separately.
All sequences derived from the 6 fossils as well as Modern Human Sequencing reads are available from the European Short Read Archive (ERA).
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The Neandertal Genome Project is based at the department of Evolutionary Genetics at the Max Planck Institute for Evolutionary Anthropology in collaboration with the Neandertal Genome Consortium. | |
| Contact: | Prof. Dr. Svante Pääbo Director, Department of Evolutionary Genetics |
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| Tel.: Fax.: |
+49 341 3550 - 500 (secretary) +49 341 3550 - 555 |
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The Neandertal Genome Browser is based on Ensembl web code. Ensembl is a joint project of the EBI and the Wellcome Trust Sanger Institute. |
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